Research Field


Research Materials

  • Yam (Dioscorea)
  • Rice (Oryza sativa)
  • Rice blast (Magnaporthe oryzae)

Research Outline

  • Plant Evolution
  • Co-evolution between Host and Pathogen
  • Evolution of Plant Resistance

Curriculum Vitae

1960 Born in 1960 at Kobe, Japan
1982 Graduated from Faculty of Agriculture, Kyoto University, Japan (Agricultural Biology)
1989 PhD from Faculty of Agriculture, Kyoto University (Origin of Crop Plants)
1990 Post-doctoral fellow at IITA, Nigeria (studying yam taxonomy)
1991 Research Associate at Botany Department, Faculty of Science, Kyoto University, Japan (plant taxonomy)
1995 Post-doctoral fellow at University of Frankfurt, Germany (Humboldt Fellowship: molecular biology of yams)
1997 Senior Scientist at Iwate Biotechnology Research Center, Iwate (IBRC), Japan (Plant molecular genetics, Plant host-pathogen interactions)
Adjunct Professor, The United Graduate School of Agricultural Sciences, Iwate University (Plant Genetics)
2008 Head, Division of Biological Sciences, IBRC
2016 Professor, Lab. Crop Evolution, Graduate School of Agriculture, Kyoto University, Japan


  • Pat Coursey Award
    From the International Society of Tropical Root
    Crops. 1994, Salvador, Brazil
  • Alexander-von-Humboldt fellowship, Germany 1995-1997
  • Daiwa-Adrian Prize 2010
    Together with Prof. Sophien Kamoun, Sainsbury Lab. Norwich, UK.

Publications [Last Updated: Nov. 29, 2017]

Research Articles
  1. Sakai, T., Abe, A., Shimizu, M., Terauchi, R. (2020). RIL-StEp: epistasis analysis of recombinant inbred lines (RILs) reveals candidate interacting genes that control rice seed hull color bioRxiv.
  2. Kato, H., Onai, K., Abe, A., Shimizu, M., Takagi, H., Tateda, C., Utsushi, H., Singkarabanit-Ogawa, S., Kitakura, S., Ono, E., Zipfel, C., Takano, Y., Ishiura, M., Terauchi, R. (2020). Lumi-Map, a real-time luciferase bioluminescence screen of mutants combined with MutMap, reveals Arabidopsis genes involved in PAMP-triggered immunity. bioRxiv.
  3. Ayra‐Pardo, C., Ochagavía, M. E., Raymond, B., Gulzar, A., Rodríguez‐Cabrera, L., Rodríguez de la Noval, C., … Terauchi, R., …, & Wright D. J. (2019). HT‐SuperSAGE of the gut tissue of a Vip3Aa‐resistant Heliothis virescens (Lepidoptera: Noctuidae) strain provides insights into the basis of resistance. Insect science, 26(3), 479-498.
  4. Takagi, M., Hamano, K., Takagi, H., Morimoto, T., Akimitsu, K., Terauchi, R., Shirasu, K., & Ichimura, K. (2019). Disruption of the MAMP-induced MEKK1-MKK1/MKK2-MPK4 pathway activates the TNL immune receptor SMN1/RPS6. Plant and Cell Physiology, 60(4), 778-787.
  5. Valent, B., Farman, M., Tosa, Y., Begerow, D., Fournier, E., Gladieux, P., … Terauchi, R., Tharreau, D., Zhang, N. (2019). Pyricularia graminis‐tritici is not the correct species name for the wheat blast fungus: response to Ceresini et al.(MPP 20: 2). Molecular plant pathology, 20(2), 173.
  6. Seto, Y., Yasui, R., Kameoka, H., Tamiru, M., Cao, M., Terauchi, R.,, … & Yamaguchi, S. (2019). Strigolactone perception and deactivation by a hydrolase receptor DWARF14. Nature communications, 10(1), 1-10.
  7. Irieda, H., Inoue, Y., Mori, M., Yamada, K., Oshikawa, Y., Saitoh, H., … Terauchi, R., … & Singkaravanit-Ogawa, S. (2019). Conserved fungal effector suppresses PAMP-triggered immunity by targeting plant immune kinases. Proceedings of the National Academy of Sciences, 116(2), 496-505.
  8. De la Concepcion, J. C., Franceschetti, M., Maqbool, A., Saitoh, H., Terauchi, R., Kamoun, S., & Banfield, M. J. (2018). Polymorphic residues in rice NLRs expand binding and response to effectors of the blast pathogen. Nature plants, 4(8), 576.
  9. Kobayashi, M., Hiraka Y., Abe, A., Yaegashi, H., Natsume, S., Kikuchi, H., Takagi, H., Saitoh, H., Win, J., Kamoun, S., Terauchi, R. (2017) Genome analysis of the foxtail millet pathogen Sclerospora graminicola reveals the complex effector repertoire of graminicolous downy mildews. BMC Genomics 18:897
  10. Tamiru, M., Natsume, S., Takagi, H., White, B., Yaegashi, H., Shimizu, M., Yoshida, K., et al. Kamoun, S., Kahl, G., Takagi, H., Asiedu, R., Terauchi, R. (2017) Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination. BMC Biology 15:86.
  11. Yoshitsu, Y., Takakusagi, M., Abe, A., Takagi, H., Uemura, A., Yaegashi, H., Terauchi, R., Takahata, Y., Hatakeyama, K., Yokoi, S. (2017) QTL-seq analysis identifies two genomic regions determining the heading date of foxtail millet, Setaria italica (L.) P.Beauv. Breeding Science DOI10.1270/jsbbs.17061
  12. Portieles, R., Ochagavia, M. E. et al. Terauchi, R., et al. Ayra-Pardo, Borras-Hidalgo, O. (2017) High-throughput SuperSAGE for gene expression analysis of Nicotiana tabacum–Rhizoctonia solani interaction. BMC Research Notes 10:603.
  13. Gladieux, P., Condon, B., Ravel, S., et al. Terauchi, R., et al. Fournier, E. (2017) Gene flow between divergent cereal- and grass-specific lineages of the rice blast fungus Magnaporthe oryzae. bioRxiv
  14. Bialas, A., Zess, E., De la Concepcion JC., et al. Terauchi, R., Banfield, M., Kamoun, S. (2017) Lessons in Effector and NLR Biology of Plant-Microbe Systems. Molecular Plant-Microbe Interactions DOI10.1094/MPMI-08-17-0196-FI.
  15. Ayra-Pardo, C., Ochavavia, ME., Raymond, B., et al. Terauchi, R., et al. Borras-Hidalgo, O., Wright, DJ. (2017) HT-SuperSAGE of the gut tissue of a Vip3Aa-resistant Heliothis virescens (Lepidoptera: Noctuidae) strain provides insights into the basis of resistance. Insect Science doi: 10.1111/1744-7917.12535.
  16. Wu C.-H., Abd-El-Haliem, A., Bozkurt, TO., Belhaj, K., Terauchi, R., Vossen, JH., Kamoun, S. (2017) NLR network mediates immunity to diverse plant pathogens. PNAS 114:8113-8118.
  17. Inoue, Y., Vy, T., Yoshida, K., et al. Terauchi, R., et al. Tosa, Y. (2017) Evolution of the wheat blast fungus through functional losses in a host specificity determinant. Science 357:80-83.
  18. Hirano K., Masuda, R., Takase, W. et al. Terauchi, R., et al. Sazuka, T. (2017) Screening of rice mutants with improved saccharification efficiency results in the identification of CONSTITUTIVE PHOTOMORPHOGENIC 1 and GOLD HULL AND INTERNODE 1. Planta 246:61-74.
  19. Hisano H., Sakamoto, K., Takagi, H., Terauchi, R., Sato, K. (2017) Exome QTL-seq maps monogenic locus and QTLs in barley. BMC Genomics 18:125.
  20. Goretti, D., Martignago, D., et al. Terauchi, R., et al. Fornara, F. (2017) Transcriptional and post-transcriptional mechanisms limit heading date 1 (Hd1) function to adapt rice to high latitudes. PLoS Genetics 13: e1006530.
  21. Urasaki, N., Takagi, H., Natsume, S., et al. Terauchi, R., Matsumura, H. (2016) Draft genome sequence of bitter gourd (Momordica charantia), a vegetable and medicinal plant in tropical and subtropical regions. DNA Research 24: DOI: 10.1093/dnares/dsw047
  22. Saitoh. H., Kanzaki, H., Fujisaki, K., Takagi, H., Yoshida, K., Terauchi, R. (2016) Rice blast resistance-inducing mechanisms via effector recognition by NLR immune receptors. Japanese J. Phytopathology DOI: 10.3186/jjphytopath.82.296
  23. Yoshida, K., Saunders, DGO., Mitsuoka, C. et al. Terauchi, R. (2016) Host specialization of the blast fungus Magnaporthe oryzae is associated with dynamic gain and loss of genes linked to transposable elements. BMC Genomics DOI: 10.1186/s12864-016-2690-6.
  24. Fukunaga, S., Sogame, M., et al, Terauchi, R. et al. Takano, Y. (2016) Dysfunction of Arabidopsis MACPF domain protein activates programmed cell death via tryptophan metabolism in MAMP-triggered immunity. Plant J. 89:381-393.
  25. Nishimura, T., Mochizuki, S., et al. Terauchi, R. et al. Nishizawa, Y. (2016) Magnaporthe oryzae Glycine-Rich Secretion Protein, Rbf1 Critically Participates in Pathogenicity through the Focal Formation of the Biotrophic Interfacial Complex. PLoS Pathogens 12(10):e1005921.
  26. Masumoto. H., Takagi, H., Mukainari, Y., Terauchi, R., Fukunaga, K. (2016) Genetic analysis of NEKODE1 gene involved in panicle branching of foxtail millet, Setaria italica (L.) P. Beauv., and mapping by using QTL-seq. Molecular Breeding 36 DOI: 10.1007/s11032-016-0481-z
  27. Singh, VK., Khan, AW., et al. Terauchi, R., Varshney, RK. (2016) QTL-seq for rapid identification of candidate genes for 100-seed weight and root / total plant dry weight ratio under rainfed conditions in chickpea. Plant Biotechnology Journal 14(11) DOI:10.1111/pbi.12567.
  28. Portieles, R., Canales, E., et al. Terauchi, R. et al. Borras-Hidalgo, O. (2016) Expression of a Nicotiana tabacum pathogen-induced gene is involved in the susceptibility to black shank. Functional Plant Biology 43(6) DOI: 10.1071/FP15350.
  29. Oli, MT., Takagi, H., Abe, A., et al. Terauchi, R. (2016) A chloroplast-localized protein LESION AND LAMINA BENDING affects defence and growth responses in rice. New Phytologist 210(4) DOI: 10.1111/nph.13864
  30. Canales, E., Coll, Y., Hernandez, I., et al. Terauchi, R., et al. Borras-Hidalgo, O. ‘Candidatus Liberibacter asiaticus’, Causal Agent of Citrus Huanglongbing, Is Reduced by Treatment with Brassinosteroids. PLoS One 11(1):e0146223
  31. Maqbool, A., Saitoh, H. Franceshetti, M., Stevenson, CEM., Uemura A., Kanzaki, H., Kamoun, S., Terauchi, R. and Banfield, MJ. (2015) Structural basis of pathogen recognition by an integrated HMA domain in a plant NLR immune receptor. eLIFE doi:10.7554/eLife.08709.002.
  32. Fujisaki, K., Abe, Y., Ito, A., Saitoh, H., Yoshida, K., Kanzaki, H., Kanzaki, E., Utsushi, H., Yamashita, T., Kamoun, S. and Terauchi, R. (2015) Rice Exo70 interacts with a fungal effector, AVR-Pii and is required for AVR-Pii-triggered immunity. Plant Journal 83:875-887.
  33. Utsushi, H., Abe, A., Tamiru, M., Ogasawaram Y., Obara, T., Sato, E., Ochiai, Y., Terauchi, R. and Takagi, H. (2015) WIPPER: an accurate and efficient field phenotyping platform for large-scale applications. Breeding Science 65:285-289.
  34. Takagi, H., Tamiru, M., Abe, A., Yoshida, K., Uermura, A., Yaegashi, H., Obara, T., Oikawa, K., Utsushi, H., Kanzaki, E., Mituoka, C., Natsume, S., Kosugi, S., Kanzaki, H., Matsumura, H., Urasaki, N., Kamoun, S. and Terauchi, R. (2015) MutMap accelerates breeding of a salt-tolerant rice cultivar. Nature Biotechnology 33:445-449.
  35. Wu, C.-H., Krasileva, KV., Banfield, MJ., Terauchi, R. and Kamoun, S. (2015) The “sensor domains” of plant NLR proteins: more than decoys? Frontiers in Plant Science 6:134.
  36. Tamiru, M., Undan, JR., Takagi, H., Abe, A., Yoshida, K., Undan, JQ., Natsume, S., Uemura, A Saitoh, H., Matsumura, H., Urasaki, N., Yokota, T. and Terauchi, R. (2015) A cytochrome P450, OsDSS1, is involved in growth and drought stress responses in rice (Oryza sativa L.). Plant Molecular Biology 88:85-99.
  37. Tamiru, M., Yamanaka, S., Mitsuoka, C., Babil, P., Takagi, H., Lopez-Montes, A., Sartie, A., Asiedu, R. and Terauchi, R. (2015) Development of genomic simple sequence repeat markers for yam. Crop Science 55:2191-2200.
  38. Ueno, H., Urasaki, N., Natsume, S., Yoshida, K., Tarora, K., Shudo, A., Terauchi, R. and Matsumura, H. (2015) Genome sequence comparison reveals a candidate gene involved in male-hermaphrodite differentiation in papaya (Carica papaya) trees. Molecular Genetics and Genomics 290:661-670.
  39. Natsume, S., Takagi, H., Shiraishi, A., Murata, J., Tayonaga, H., Patzak, J., Takagi, M., Yaegashi, H., Uemura, A., Mituoka, C., Yoshida, K., Krofta, K., Satake, H., Terauchi, R. and Ono, E. (2014) The draft genome of hop (Humulus lupulus), and essence for brewing. Plant and Cell Physology 56:428-441.
  40. Fekih, R., Tamiru, M., Kanzaki, H., Abe, A., Yoshida, K., Kanzaki, E., Saitoh, H., Takagi, H., Natsume, S, Undan, JR., Undan, J. and Terauchi, R. (2014) The rice (Oryza sativa L.) LESION MIMIC RESEMBLING, which encodes an AAA-type ATPase, is implicated in defense response. Molecular Genetics and Genomics 290:611-622.
  41. Kosugi, S., Yanagawa, H., Terauchi, R. and Tabata, S. (2014) NESmapper: Accurate prediction of leucine rich nuclear export signals using activity-based profiles. PLoS Computational Biology 10:e1003841.
  42. Cesari, S., Kanzaki, H., Fujiswara, T., Bernoux, M., Chalvon V., Kawano, Y., Shimamoto, K., Dodds, P., Terauchi, R. and Kroj, T. (2014) The NB-LRR proteins RGA4 and RGA5 interact functionally and physically to confer disease resistance. EMBO Journal 33:1941-1959.
  43. Irieda, H., Maeda, H., Akiyama, K., Hagiwara, A., Saitoh, H., Uemura, A., Terauchi, R. and Takano, Y. (2014) Colletotrichum orbiculare secretes virulence effectors to a biotrophic interface at the primary hyphal neck via exocytosis coupled with SEC22-mediated traffic. Plant Cell 26:2265-2281.
  44. Sone, T., Miki, S., Ose, T., Oikawa, A., Maenaka, K., Terauchi, R., Asano, K. and Satoh, Y. (2014) Heterologous production, purification, and immnodetection of Magnaporthe oryzae aviruence protein AVR-Pia. Bioscience Biotechnology and Biochemistry 78:680-686.
  45. Tamiru, M., Abe, A., Utsushi, H., Yoshida, K., Takagi, H., Fujisaki, K., Undan, JR., Rakshit, S., Takaichi, S., Jikumaru, Y., Yokota, T., Terry, MJ. and Terauchi, R. (2014) The tillering phenotype of the rice plastid terminal oxidase (PTOX) loss-of-function mutant is associated with strigolactone deficiency. New Phytologist 202:116-131.
  46. Saitoh, H., Hirabuchi, A., Fujisawa, S., Mitsuoka, C., Terauchi, R. and Takano, Y. (2014) MoST1 encoding a hexose transporter-like protein is involved in conidiation and mycelial melanization of Magnaporthe oryzae. FEMS Microbiology Letter 352:104-113.
  47. Fawcett, JA., Kado, T., Sasaki, E., Takuno, S., Yoshida, K., Sugino, RP., Kosugi, S., Natsume, S., Mitsuoka, C., Uemura, A., Takagi, H., Abe, A., Ishii, T., Terauchi, R. and Innan, H. (2013) QTL map meets population genomics: an application to rice. PLoS ONE 8:e83720.
  48. Kosugi, S., Natsume, S., YoshidaK., MacLean, D., Cano, L., Kamoun, S. and Terauchi, R. (2013) Coval: Improving alignment quality and variant call accuracy for next-generation sequencing data. PLoS One 8:e75402.
  49. Silva, Y., Portieles, R., Pujol, M., Terauchi, R., Matsumura, H., Serrano, M. and Borras-Hidalgo, O. (2013) Expression of a microbial serine proteinase inhibitor gene enhances the tobacco defense against oomycete pathogens. Physiological and Molecular Plant Pathology 84:99-106.
  50. Fekih, R., Takagi, H., Tamiru, M., Abe, A., Natsume, S., Yaegashi, H., Sharma, S., Sharma, S., Kanzaki, H., Matsumura, H., Saitoh, H., Mitsuoka, C., Utsushi, H., Uemura, A., Kanzaki, E., Kosugi, S., Yoshida, K., Cano, L., Kamoun, S. and Terauchi, R. (2013) MutMap+: Genetic mapping and mutant identification without crossing in rice. PLoS ONE 8:e68529.
  51. Takagi, H., Uemura, A., Yaegashi, H., Tamiru, M., Abe, A., Mitsuoka, C., Utsushi, H., Natsume, S., Kanzaki, H., Matsumura, H., Saitoh, H., Yoshida, K., Cano, LM., Kamoun, S. and Terauchi, R. (2013) MutMap-Gap: whole-genome resequencing of mutant F2 progeny bulk combined with de novo assembly of gap regions identifies the rice blast resistance gene Pii. New Phytologist 200:276-283.
  52. Giraldo, MC., Dagdas, YF., Gupta, YK., Mentlak, TA., Yi, M., Martinez-Rocha, AL., Saitoh, H., Terauchi, R., Talbot, NJ. and Valent, B. (2013) Two distinct secretion systems facilitate tissue invasion by the rice blast fungus Magnaporthe oryzae. Nature Communications 4: doi:10.1038/ncomms2996
  53. Cesari, S., Thilliez, G., Ribot, C., Chalvon, C., Michel, C., Jauneau, A., Rivas, S., Alaux, L., Kanzaki, H., Okuyama, Y., Morel, J.-B., Fournier, E., Tharreau, D., Terauchi, R. and Kroj, T. (2013) The rice resistance protein pair RGA4/RGA5 recognizes the Magnaporthe oryzae effectors AVR-Pia and AVR1-CO39 by direct binding. Plant Cell 25:1463-1481.
  54. Sharma, S., Sharma, S., HIrabuchi, A., Yoshida, K., Fujisaki, K., Ito, A., Uemura, A., Terauchi, R., Kamoun, S., Sohn, KH., Jones JDG., and Saitoh, H. (2013) Deployment of the Burkholderia glumae type III secretion system as an efficient tool for translocating pathogen effectors to monocot cells. Plant Journal 74:701-712.
  55. Ishii, T., Numaguchi, K., Miura, K., Yoshida, K., Thanh, PT., Htun, TM., Yamasaki, M., Komeda, N., Matsumoto, T., Terauchi, R., Ishikawa, R. and Ashikari, M. (2013) OsLG1 regulates a closed panicle trait in domesticated rice. Nature Genetics 45:462-465.
  56. Kasai, M., Matsumura, H., Yoshida, K., Terauchi, R., Taneda, A. and Kanazawa, A. (2013) Deep sequencing uncovers commonality in small RNA profiles between transgene-induced and naturally occurring RNA silencing of chalcone synthase-A gene in petunia. BMC Genomics 14:63.
  57. Takagi, H., Abe, A., Yoshida, K., Kosugi, S., Natsume, S., Mitsuoka, C., Uemura, A., Utsushi, H., Tamiru, M., Takuno, S., Innan, H., Cano, LM., Kamoun, S. and Terauchi, R. (2013) QTL-seq: rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations. Plant Journal 74:174-183.
  58. Takuno, S., Terauchi, R. and Innan H. (2012) The power of QTL mapping with RILs. PLoS ONE 7:e46545.
  59. Kanzaki, H., Yoshida, K., Saitoh, H., Fujisaki, K., Hirabuchi, A., Alaux, L., Fournier, E., Tharreau, D. and Terauchi, R. (2012) Arms race co-evolution of Magnaporthe oryzae AVR-Pik and rice Pik genes driven by their physical interactions. Plant Journal 72:894-907.
  60. Undan, JR., Tamiru, M., Abe, A., Yoshida, K., Kosugi, S., Takagi, H., Yoshida, K., Kanzaki, K., Saitoh, H., Fekih, R., Sharma, S., Undan, J., Yano, M. and Terauchi, R. (2012) Mutation in OsLMS, a gene encoding a protein with two double-stranded RNA binding motifs, causes lesion mimic phenotype and early senescence in rice (Oryza sativa L.). Gene and Genetic Systems 87:169-179.
  61. Saitoh, H., Fujisawa, S., Mitsuoka, C., Ito, A., Hirabuchi, A., Ikeda, K., Irieda, H., Yoshino, K., Yoshida, K., Matsumura, H., Tosa, Y., Kamoun, S., Takano, Y. and Terauchi, R. (2012) Large-scale gene disruption in Magnaporthe oryzae identifies MC69, a secreted protein required for infection by monocot and dicot fungal pathogens. PLoS Pathogens 8(5) e1002711.
  62. Abe, A., Takagi, H., Fujibe, T., Aya, K., Kojima, M., Sakakibara, H., Uemura, A., Matsuoka, M. and Terauchi, R. (2012) OsGA20ox1, a candidate gene for a major QTL controlling seedling vigor in rice. Theor. Appl. Genet. 125:647-657.
  63. Abe, A, Kosugi, S, Yoshida, K, Natsume, S, Takagi, H, Kanzaki, H, Matsumura, H, Yoshida, K, Mitsuoka, C, Tamiru, M, Innan, H, Cano, L, Kamoun, S, Terauchi, R. (2012) Genome sequencing reveals agronomically important loci in rice using MutMap. Nature Biotechnol. 30:174-178.
  64. Shenton, MR, Berberich, T, Kamo, M, Yamashita, T, Taira, H and Terauchi, R. (2012) Use of Intercellular washing fluid to investigate the secreted proteome of the rice-Magnaporthe interactions. J. Plant Research 125:311-316.
  65. Mentlak, TA, Kombrink, A., Shinya, T, Ryder, LS, Otomo, I, Saitoh, H, Terauchi, R., Nishizawa,, Y, Shibuya, N, Thomma, BPHJ, Talbot, NJ. (2012) Effector-mediated suppression of chitin-triggered immunity by Magnaporthe oryzae is necessary for rice blast disease. Plant Cell 24:322-335.
  66. Ito-Inaba Y., Hida Y., Matsumura H., Masuko H., Yazu F., Terauchi, R., Watanabe M., Inaba T. (2012) The gene expression landscape of thermogenic skunk cabbage suggests critical roles for mitochondrial and vacuolar metabolic pathways in the regulation of themogenesis. Plant, Cell & Environment 35:554-566.
  67. Chuma I., Isobe C., Hotta Y., Ibaragi K., Futamata N., Kusaba M., Yoshida K., Terauchi, R., Fujita Y., Nakayashiki H., Valent B., and Tosa Y. (2011) Multiple translocation of the AVR-Pita effector gene among chromosome of the rice blast fungus Magnaporthe oryzae and related species. PLoS Pathogens 7(7): e1002147.
  68. Okyuama, Y., Kanzaki, H., Abe, A., Yoshida, K., Tamiru, M., Saitoh, H., Fujibe, T., Matsumura, H., Shenton, M., Galam, DC., Undan, J., Ito, A., Sone, T. and Terauchi, R. (2011) A multifaceted genomics approach allow the isolation of the rice Pia-blast resistance genes consisting of two adjacent NBS-LRR protein genes. Plant J. 66:467-479.
  69. Pinto, PIS., Matsumura, H., Thorne, MAS., Power, DM, Terauchi, R., Reinhardt, R., Canario, AVM. (2010) Gill transcriptome response to changes in environmental calcium. BMC Genomics 11:476.
  70. Ishikawa T., Takahara, K., Hirabayashi, T., Matsumura, H., Fujisawa, S. Terauchi, R., Uchimiya, H. and Kawai-Yamada, M. (2010) Metabolome analysis of response to oxidative stress in rice suspension cells overexpressing cell death suppressor Bax Inhibitor-1. Plant Cell Physiol. 51:9-20.
  71. Takeda T., Takahashi, M., Nakanishi-Masuno, T., Nakano, Y., Saitoh H., Hirabuchi, A., Fujisawa, S. and Terauchi, R. (2010) Characterization of a cellobiohydrolase (MoCel6A) in Magnaporthe oryzae. Applied and Environmental Microbiology. 83:1113-1123.
  72. Takahashi, M., Takahashi, H., Nakano, Y., Konishi, T., Terauchi, R. and Takeda, T. (2010) Characterization of endo-1,3-1,4-β-glucanases in GH family 12 from Magnaporthe oryzae. Applied Microbiology and Biotechnology. 76:6583-6590.
  73. Matsumura H., Yoshida K., Luo S., Kimura E., Fujibe T., Albertyn Z., Barrero, R., Krueger DH, Kahl G, Schroth GP. and Terauchi, R. (2010) High-throughput SuperSAGE for digital gene expression analysis of multiple samples using Next Generation Sequencing. PLoS ONE 5(8) e12010.
  74. Till, BJ., Jankowicz-Sieslak, J., Huynh, OW, Sagi, L., Utsushi, H., Swennen, R., Terauchi, R. and Mba, C. Discovery of natural nucleotide polymorphisms in Musa accessions by Ecotilling. Theor. Appl. Genet. 121:1381-1389.
  75. Terauchi, R. and Yoshida, K. (2010) Towards population genomics of effector-effector target interactions. New Phytologist 187:929-939.
  76. Matsumura, H., Kruger, D. H., Kahl, G. and Terauchi, R. (2008) SuperSAGE: a modern platform for genomi-wide quantitative transcript profiling. Current Pharmaceutical Biotechnol. 9:368-374.
  77. Kakizaki, T., Matsumura, H., Nakayama, K., Che, F.-S., Terauchi, R. and Inaba, T. Coordination of plastid protein import and nuclear gene expression by plastid-to-nucleus retrograde signaling. Plant Physiol. 151:1339-1353.
  78. Saitoh, H., Fujisawa, S., Ito, A., Mitsuoka, C., Berberich, T., Tosa, Y., Asakura, M., Takano, Y. and Terauchi, R. (2009) SPM1 encoding a vacuole-localized protease is required for infection-related autophagy of the rice blast fungus Magnaporthe oryzae. FEMS Microbiology Letters 300:115-121
  79. Yoshida, K., Saitoh, H., Fujisawa, S., Kanzaki, H., Matsumura, H., Yoshida, K., Tosa, Y., Chuma, I., Takano, Y., Win, J., Kamoun, S. and Terauchi, R. (2009) Association genetics reveals three novel avirulence genes from the rice blast fungal pathogen Magnaporthe oryzae. Plant Cell 21:1573-1591.
  80. Raftery, MJ., Moncke-Buchner, E., Matsumura, H., Giese, T., Winkelmann, B., Reuter, M., Terauchi, R., Schonrich, G. and Kruger, DH. (2009) Unravelling the interaction of human cytomegalovirus with dendritic cells by using SuperSAGE. J. Gen. Virol. 90:2221-2233.
  81. Moencke-Buchner, E. , Rothenberg, M., Reich, S., Wagenfuehr, K., Matsumura, H., Terauchi, R., Reuter, M., Krueger, D.H. (2009) Functional characterization and modulation of the DNA cleavage efficiency of Type III restriction enconuclease EcoP15I in its interaction with two sites in the DNA target. Journal of Mol. Biol. 387:1309-1319.
  82. Takahashi, Y., Berbeich, T., Kanzaki, H., Matsumura, H., Saitoh, H., Kusano, T. and Terauchi, R. (2009) Unraveling the roles of sphingolipids in plant innate immunity. Plant Signaling & Behavior, 4:536-538.
  83. Medina, C. M. M., Rotter, B., Horres, R., Udupa, S., Besser, B., Bellarmino, L. C., Baum, M., Matsumura, H., Terauchi, R., Kahl, G., Winter, P. (2008) SuperSAGE: The drought stress-responsive transcriptome of chickpea roots. BMC Genomics. 9:553.
  84. Hogenhout, S. A., van der Hoorn, R. A. L., Terauchi, R. and Kamoun, S. (2008) Emerging concepts in effector biology of plant-associated organisms. Mol. Plant-Microbe Interact. 22:115-122.
  85. Takahashi, Y., Berberich, T., Kanzaki, H., Matsumura, H., Saitoh, H., Kusano, T., Terauchi, R. (2008) Serine palmitoyltransferase, the first step enzyme in sphingolipid biosynthesis, is involved in non-host resistance. Mol. Plant-Microbe Interact. 22:31-38.
  86. Mitsuya, Y., Takahashi, Y., Berberich, T., Miyazaki, A., Matsumura, H., Takahashi, H., Terauchi, R., Kusano, T. (2008) Spermine signaling plays a significant role in the defense response of Arabidopsis thaliana to cucumber mosaic virus. J. Plant Physiol. 166:626-643.
  87. Hamada, H., Matsumura, H., Tomita, R., Terauchi, R., Suzuki, K., Kobayashi, K. (2008) SuperSAGE revealed different classes of early resistance response genes in Capsicum chinense plants harboring L3-resistance gene infected with Pepper mild mottle virus. J. General Plant Pathol. 74:313-321.
  88. Kanzaki, K., Saitoh, H., Takahashi, Y., Berberich, T., Ito, A., Kamoun, S. and Terauchi, R. (2008) NbLRK1, a lectin-like recepter kinase protein of Nicotiana benthamiana, interacts with Phytophthora infestans INF1 elicitin and mediates INF1-induced cell death. Planta 228:977-987.
  89. Wang, G.-X., Imaizumi, T., Li, W., Saitoh, H., Terauchi, R., Ohsako, T., Tominaga, T. (2008) Self-EcoTILLING to identify single-nucleotide mutations in multigene family. Pesticide Biochemisty and Physiology. 92:24-29.
  90. Carpentier, S.C., Coemans, B,. Podevin, N., Laukens, K., Witters, E., Matsumura, H., Terauchi, R., Swennen, R., Panis, B., Carpentier (2008) Functional genomics in a non-model crop: transcriptomics or proteomics? Physiologia Plantarum 133:117-30.
  91. Coemans, B., Takahashi, Y., Berberich, T., Ito, A., Kanzaki, H., Matsumura, H., Saitoh, H., Tsuda, S., Kamoun, S., Sagi, L., Swennen, R. and Terauchi, R. (2008) High-throughput in planta expression screening identifies an ADP-ribosylation factor (ARF1) involved in non-host resistance and R gene-mediated resistance. Molecular Plant Pathology 9:25-36.
  92. Hirano, T., Ito, A., Berberich, T., Terauchi, R., Saitoh, H. (2007) Virus-induced gene silencing of 14-3-3 genes abrogates dark repression of nitrate reductase activity in Nicotiana benthamiana. Molecular Genetics and Genomics 278:125-33.
  93. Wang, G.-X., Tan, M.-K., Rakshit, S., Saitoh, H., Terauchi, R., Imaizumi, T., Ohsako, T., Tominaga, T. (2007) Discovery of single-nucleotide mutations in acetolactate synthase genes by Ecotilling. Pesticide Biochem and Physiol. 88:143-148.
  94. Takahashi, Y., Bin Nasir, K. H., , Ito, A., Kanzaki, H., Matsumura, H., Saitoh, H., Fujisawa, S., Kamoun, S., Terauchi, R. (2007) A Novel MAPKK Involved in Cell Death and Defense Signaling. Plant Signaling and Behavior 2: 396-398.
  95. Rakshit, S., Rakshit , A., Matsumura, H., Takahashi, Y., Hasegawa, Y., Ito, A., Ishii, T., Miyashita, N. T., Terauchi, R. (2007) Large-scale DNA polymorphism study of Oryza sativa and O. rufipogon reveals the origin and divergence of Asian rice. Theoretical and Applied Genetics 114:731-743.
  96. Takahashi, Y., Bin Nasir, K. H., , Ito, A., Kanzaki, H., Matsumura, H., Saitoh, H., Fujisawa, S., Kamoun, S., Terauchi, R. (2006) A high-throughput screen of cell-death-inducing factors in Nicotiana benthamiana identifies a novel MAPKK that mediates INF1-induced cell death signaling and non-host resistance to Pseudomonas cichorii. Plant Journal 49:1030-40.
  97. Kojo K, Yaeno T, Kusumi K, Matsumura H, Fujisawa S, Terauchi, R. and Iba K. (2006) Regulatory mechanisms of ROI generation are affected by rice spl mutations. Plant Cell Physiol. 47:1035-1044.
  98. Miura, R. and Terauchi, R. (2005) Genetic control of weediness traits and the maintenance of sympatric crop-weed polymorphism in pearl millet (Pennisetum glaucum). Molecular Ecology 14:1251-61.
  99. Matsumura H, Bin Nasir, KH, Yoshida K, Ito A, Kahl G, Krueger, DH. and Terauchi, R. (2006) SuperSAGE-Array: The direct use of 26bp transcript tags in oligonucleotide arrays for deep and genome-wide gene expression analysis. Nature Methods 3:469-474.
  100. Uehara, Y., Takahashi, Y., Berberich, T., Miyazaki, A., Takahashi, H., Matsui, K., Ohme-Takagi, M., Saitoh, H., Terauchi, R. and Kusano, T. (2005) Tobacco ZFT1, a transcriptional repressor with a Cys2/His2 type zinc finger motif that functions in spermine-signaling pathway. Plant Molecular Biology 59:435-448.
  101. Terauchi, R., Nasir KHB, Ito A, Saitoh H, Berberich T. and Takahashi Y. (2005) High-throughput functional screening of plant and pathogen genes in planta. Plant Biotechnology 22:455-459.
  102. Coemans, B., Matsumura, H., Terauchi, R., Remy, S., Swennen, R. and Sági, L. (2005) SuperSAGE combined with PCR walking allows global gene expression profiling of banana (Musa acuminata), a non-model organism. Theoretical and Applied Genetics 111:1118-26.
  103. Nasir, K., Takahashi, Y., Ito, A., Saitoh, H., Matsumura H, Kanzaki H, Shimizu T, Ito M, Fujisawa S, Sharma PC, Ohme-Takagi M, Kamoun S and Terauchi, R. (2005) High-throughput in planta expression screening identifies a class II ethylene responsive element binding factor-like protein that regulates plant cell death and nonhost resistance. The Plant J.43:491-505.
  104. Kahl, G., Winter, P., Matsumura, H., Reuter, M., Kruger, D. and Terauchi, R. (2004) Molekulares Wechselspiel von Wirt und Pathogen: Simultane, genomweite Transkript profilierung zweier Organismen mit SuperSAGE. Biospektrum 10: 511-513.
  105. Takahashi, Y., Uehara, Y., Berberich, T.,Ito, A.,Saitoh, H., Miyazaki, A., Terauchi, R., Kusano, T. (2004) A subset of hypersensitive response marker genes, including HSR203J, is the downstream target of a spermine signal transduction pathway in tobacco. Plant J. 40:596-595.
  106. Matsumra, H., Ito, A., Saitoh, H., Winter, P., Kahl, G., Reuter, M., Krueger, D. H. and Terauchi, R. (2005) SuperSAGE Cellular Microbiology 7:11-18.
  107. Matsumura, H., Reich, S., Ito, A., Saitoh, H., Kamoun, S., Winter, P., Kahl, G., Reuter, M., Krueger, D., and Terauchi, R. (2003) Gene expression analysis of plant host-pathogen interactions by SuperSAGE. Procceding of National Academy of Science USA. 100:15718-15723.
  108. Irie, T., Matsumura, H., Terauchi, R. and Saitoh H. (2003) Profiling of the genes involved in appressorium formation of Magnaporthe grisea by Serial Analysis of Gene Expression (SAGE). Molecular Genetics and Genomics 270:181-189.
  109. Kanzaki, H., Saitoh, H., Ito, A., Fujisawa, S., Kamoun, S., Katou, S., Yoshioka, H. Terauchi, R. (2003) Cytosolic HSP90 and HSP70 are essential components of Inf1-mediated hypersensitive response and non-host resistance to Pseudomonas cichorii in Nicotiana benthamiana. Molecular Plant Pathology 4:383-391.
  110. Fregene M., Matsumura H. and Terauchi, R. (2003) Serial Analysis of Gene Expression (SAGE) of Host Plant Resistance to the Cassava Mosaic Disease (CMD). Plant Molecular Biology 56:563-571.
  111. Sharma, P. C., Ito, A., Shimizu, T., Terauchi, R., Kamoun S. and Saitoh, H. (2003) Virus-induced silencing of WIPK and SIPK genes reduces resistance against a bacterial pathogen but no effect on INF1 induced HR in Nicotiana benthamiana. Molecular and Genetics and Genomics 269:583-591.
  112. Urasaki, N., Tarora, K., Uehara, T., Chinen, I., Terauchi, R. and Tokumoto, M. (2003) Rapid and highly reliable sex diagnostic PCR assay for papaya (Carica papaya L.). Breeding Science 52:333-335.
  113. Matsumura, H., Nirasawa, S., Kiba, A., Urasaki, N., Saitoh, H.,Ito, M., Kawai-Yamada, M., Uchimiya, H. and Terauchi, R. (2003) Overexpression of Bax-inhibitor suppresses the fungal elicitor-induced cell death in rice (Oryza sativa L.) cells. The Plant Journal 33:425-434.
  114. Kanzaki, H., Nirasawa, S., Saitoh, H., Ito, M., Nishihara, M., Terauchi, R. and Nakamura, I. (2002) Overexpressing of wasabi defensin gene confers enhanced resistance to blast fungus (Magnaporthe grisea) in transgenic rice. Theoretical and Applied Genetics. 105:809-814.
  115. Saitoh, H. and Terauchi, R. (2002) Virus-induced silencing of a FtsH gene in Nicotiana benthmiana plants causes a striking bleached leaf phenotyp. Gene and Genetic Systems. 77:335-340.
  116. Urasaki, N., Tokumoto, M., Tarora, K., Ban, Y., Kayano, T., Tanaka, H., Oku, H., Chinen, I. and Terauchi, R. (2002) Male and hermaphrodite specific RAPD marker for papaya (Carica papaya L.). Theoretical and Applied Genetics 104:281-285.
  117. Konuma A. and Terauchi, R. (2001) Population genetic structure of the self-compatible annual herb; Polygonum thunbergii (Polygonaceae) detected by multilocus DNA fingerprinting. The American Midland Naturalist 146:122-127.
  118. Saitoh , H., Kiba, A., Nishihara, M., Yamamura, Suzuki, K. and Terauchi, R. (2001) Production of antimicrobial defensin in Nicotiana benthamiana with a potato virus X vector. Molecular plant-microbe interactions, 14(2), 111-115.
  119. Urasaki, N., Tokumoto, M., Terauchi, R., Tarora, K., Chinen, I., Ban, Y., Kayano, Y. and Tanaka, H. (2000) cDNA cloning and molecular analysis of Papaya small GTP-binding protein gene pgp1. Gene and Genetic Systems 75:293-298.
  120. Terauchi, R. and Kahl, G. (2000) Rapid isolation of promoter sequences with TAIL-PCR: The 5′-flanking regions of Pal and Pgi genes from yams. Molecular and General Genetics 263:554-560.
  121. Matsumura, H., Nirasawa, S. and Terauchi, R. (1999) Transcript profiling in rice (Oryza sativa L.) seedlings using serial analysis of gene expression (SAGE). The Plant Journal 20:1-8.
  122. Innan, H., Terauchi, R., Kahl, G. and Tajima, F. (1999) A method for estimating nucleotide diversity from AFLP data. Genetics 151:1157-1164.
  123. Terauchi, R. and Kahl, G. (1999) Mapping of the Dioscorea tokoro genome: AFLP markers linked to sex. Genome 42:752-762.
  124. Miyashita, N. T., Kawabe, A., Innan, H., and Terauchi, R. (1998) Intra- and interspecific DNA variation and codon bias of the alcohol dehydrogenase (Adh) locus in Arabis and Arabidopsis species. Molecular Biology and Evolution. 15:1420-1429.
  125. Ramser, J., Weising, K., Lopez-Peralta, C., Terhalle, W., Terauchi, R. and Kahl, G. (1997) Molelcular marker-based taxonomy and phylogeny of Guinea Yam. Genome 40: 903-915.
  126. Kawabe, A., Miyashita, N. T. and Terauchi, R. (1997) Phylogenetic relationship among the section Stenophora in the genus Dioscorea based on the analysis of nucleotide sequence variation in the phosphoglucose isomerase (Pgi) locus. Gene and Genetic Systems. 72: 253-262.
  127. Kawabe, A., Innan, H., Terauchi, R. and Miyashita, N. T. (1997) Nucleotide polymorphism in the acidic chitinase locus (ChiA) of Arabidospsis and Arabis species. Molecular Biology and Evolution 14:1303-1315.
  128. Terauchi, R., Terachi, T. and Miyashita, N. T. (1997) DNA polymorphism at the Pgi locus of a wild yam, Dioscorea tokoro. Genetics 146:1899-1914.
  129. Innan, H., Terauchi, R. and Miyashita, N. T. (1997) Microsatellite polymorphism in natural populations of the wild plant Arabidopsis thaliana. Genetics 146:1441-1452
  130. Innan, H., Tajima, F., Terauchi, R. and Miyashita, N. T. (1996) Intragenic recombination in the Adh locus of a wild plant Arabidopsis thaliana. Genetics 143:1761-1770.
  131. Zheng, J. T., Irifune, K., Miyashita, N., Terauchi, R., Uchiyama, H., Nakata, M., Tanaka, R. and Morikawa, H. (1995) Phylogenetic relationships between six species of Phaseolus and Vigna as determined by RFLP analysis of ribosomal DNA. Japanese Journal of Genetics 70:615-626.
  132. Miyashita, N. T., Innan, H. and Terauchi, R. (1995) Intra- and interspecific variation of alcohol dehydrogenase locus region in wild plants Arabis gemmifera and Arabidopsis thaliana. Molecular Biology and Evolution 13:433-436.
  133. Todokoro, S., Terauchi, R. and Kawano, S. (1995) Microsatellite polymorphism in natural populations of Arabidopsis thaliana in Japan. Japanese Journal of Genetics 70:543-554.
  134. Kato, H., Terauchi, R., Utech, F. H. and Kawano, S. (1995) Molecular systematics of Trilliaceae sensu lato as inferred from rbcL sequence data. Molecular Phylogenetics and Evolution 4:184-193.
  135. Kato, H., Kawano, S., Terauchi, R., Ohara, M., Utech, F. H. (1995) Evolutionary biology of Trillium and related genera (Trilliaceae) I. Restrictuion site mapping and variation of chloroplast DNA and its systematic implications. Plant Species Biol. 9:11-18.
  136. Kisanuki, H., Kurahashi, A., Kato, H., Terauchi, R., Kawano, S., Ide, Y. and Watanabe, S. (1995) Interspecific relationship of the genus Larix inferred from the RFLPs of chloroplast DNA. Journal of the Japanese Forestry Society 77:83-85.
  137. Innan, H., Terauchi, R., Miyashita, N. and Tsunewaki, K. (1995) DNA fingerprinting study on the intraspecific variation and the origin of Prunus yedoensis (Someiyoshino). Japanese Journal of Genetics 70:179-184.
  138. Terauchi, R. (1994) A polymorphic microsatellite marker from the tropical tree Dryobalanops lanceolata (Dipterocarpaceae). Japanese Journal of Genetics 69: 567-576
  139. Terauchi, R. and Konuma, A. (1994) Microsatellite polymorphism in Dioscorea tokoro, a wild yam species. Genome 37:794-801
  140. Shinwari, Z. K., Kato, H., Terauchi, R. and Kawano, S. (1994) Phylogenetic relationships among genera in the Liliaceae-Asparagoideae- Polygonatae sensu lato inferred from rbcL gene sequence data. Plant Systematics and Evolution 192: 263-277.
  141. Shinwari, Z. K., Terauchi, R., Utech, F. and Kawano, S. (1994) Recognition of the New World Disporum section Prosartes as Prosartes (Liliaceae) based on the sequence data of the rbcL gene. Taxon 43: 353-366.
  142. Shinwari, Z. K., Terauchi, R. and Kawano, S. (1994) Molecular Systematics of Liliaceae — Asparagoideae — Polygonatae. I. RFLP Analysis of cpDNA in Several Asiatic Disporum Species Plant Species Biology 9:11-18
  143. Terauchi, R., Chikaleke, V. A., Thottappilly, G. and Hahn, S. K. (1992) Origin and phylogeny of Guinea yams as revealed by RFLP analysis of chloroplast DNA and nuclear ribosomal DNA. Theoretical and Applied Genetics. 83: 743-751.
  144. Terauchi, R. (1991) Taxonomy and phylogeny of Guinea yam of West Africa. Acta Phytotax. Geobot. 42: 93-105.
  145. Terauchi, R., Terachi, T. and Tsunewaki, K. (1991) Intraspecific variation of chloroplast DNA in Dioscorea bulbifera L. Theoretical and Applied Genetics. 81: 461-470.
  146. Terauchi, R. (1990) Genetic diversity and population structure of Dioscorea tokoro Makino, a dioecious climber. Plant Species Biology 5: 243-253.
  147. Terauchi, R., Terachi, T. and Tsunewaki, K. (1989) Physical map of chloroplast DNA of aerial yam, Dioscorea bulbifera L. Theoretical and Applied Genetics. 78: 1-10.
  1. Terauchi, R., Kanzaki, H., Fujisaki, K., Takagi, H., Abe, A. et al. (2016) Whole genome sequencing approaches to understand Magnaporthe-rice interactions. Physiological and Molecular Plant Pathology 95 DOI :10.1016/j.pmpp.2016.03.007
  2. Terauchi, R., Abe, A., Takagi, H., Tamiru, M., Fekih, R., Natsume, S., Yaegashi, H., Kosugi, S., Kanzaki, H., Matsumura, H., Saitoh, H., Yoshida, K., Cano, L. and Kamoun, S. (2015) Whole genome sequencing to identify genes and QTL in rice. In: Sablok, G., Kumar, S., Ueno, S., Kuo, J., Varotto, C. (eds) Advances in the Understanding of Biological Sciences Using Next Generation Sequencing (NGS) Approaches. Springer pp33.
  3. Matsumura, H., Krueger, DH., Kahl, G. and Terauchi, R. (2015) SuperSAGE as an analytical tool for host and viral gene expression. Methods in Molecular Biology 1236:181-195.
  4. Varshney, RK., Terauchi, R. and McCouch, SR. (2014) Harvesting the promising fruits of genomics: Applying genome sequencing technologies to crop breeding. PLoS Biology 12:e1001883.
  5. Kanzaki, H., Yoshida, K., Saitoh, H., Tamiru, M. and Terauchi, R. (2014) Protoplast cell death assay to study Magnaporthe oryzae AVR gene function in rice. Methods in Molecular Biology 1127:269-275.
  6. Matsumura, H., Molina, C., Krueger, DH., Terauchi, R. and Kahl, G. (2012) DeepSuperSAGE: high-throughput transcriptome sequencing with now- and next-generation sequencing technologies. In: Tag-based next generation sequencing (Harbers, M. and Kahl, G. eds), Wiley-Blackwell, pp.3-21.
  7. Terauchi, R., Abe, A., Takagi, H., Yoshida, K., Kosugi, S., Natsume, S., Yaegashi, H., Kanzaki, H., Matsumura, H., Mitsuoka, C., Utsushi, H., Tamiru, M. (2012) Whole genome sequencing and future breeding of rice. J. Plant Biochem. Biotechnol. 21: 10-14.
  8. Terauchi, R., Yoshida, K., Saitoh H., Kanzaki, H., Okuyama, Y., Fujisaki, K., Miya, A., Abe, A., Tamiru, M, Tosa, Y. (2011) Studying genome-wide DNA polymorphisms to understand Magnaporthe-rice interactions. Australasian Plant Pathol. 40:328-334.
  9. Terauchi, R., Yoshida, K., Saitoh, H., Matsumura, H., Tamiru, M., Abe, A., Undan, J., Okuyama, Y. (2011) Association genetics reveals genes critical for Magnaporthe-rice interactions. IN: Wolpert, T., Shiraishi, T., Collmer, A., Akimitsu, K., Glazebrook, J. eds. Genome-enabled analysis of plant-pathogen interactions. APS press. pp33-38.
  10. Matsumura, H., Yoshida, K., Luo, S., Krueger, DH., Kahl, G., Schroth, GP, Terauchi, R. (2010) High-throughput SuperSAGE Methods in Molecular Biology 687:135-146.
  11. Rakshit, S., Kanzaki, H., Matsumura, H., Rakshit, A., Fujibe, T., Okuyama, Y., Yoshida, K., Tamiru, O. M., Shenton, M., Utsushi, H., Mitsuoka, C., Abe, A., Kiuchi, Y., Terauchi, R. (2010) Use of TILLING for reverse and forward genetics or rice. In: Meksem, K. and Kahl, G. (eds) The Handbook of Plant Mutation Screening (Wiley-VCH), pp185-197.
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  13. Terauchi, R., Win, J., Kamoun, S., Matsumura, H., Saitoh, H., Kanzaki, H., Yoshida, K., Shenton, M., Berberich, T., Fujisawa, S., Ito, A., Takano, Y., Tosa, Y. (2008) Searching for effectors of Magnaporthe oryzae: a multi-faceted genomics approach. In: Rice Blast (Wang, G.-L. and Pang eds.) Springer. Pages 105-112.
  14. Berberich, T., Takahashi, Y,m Saitoh, H., Terauchi, R. (2007) High-throughput functional screening of genes in planta. In: Handbook of plant functional genomics. (Kahl, G., Meksam, K. eds) Wiley VCH. Doi:10.0002 Chapter 6 pp113-136.
  15. Terauchi, R., Matsumura, H., Krueger, D. H., Kahl, G. (2007) SuperSAGE: The most advanced transcriptome technology for functional genomics. In: Handbook of plant functional genomics. (Kahl, G., Meksam, K. eds) Wiley VCH. Doi:10.0002 Chapter 3, pages 37-54.
  16. Terauchi, R., Matsumura, H., Ito, A., Fujisawa, S., Bin Nasir, K. H., Saitoh, H., Kamoun, S., Winter, P., Kahl, G., Reuter, M., Krueger, D. (2006) SuperSAGE, a potent tool to dissect plant-microbe Interactions In: Biology of Molecular Plant-Microbe Interactions. (Geiger, O., Sanchez, eds) Vol 5: 569.
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  27. 松村英生、寺内良平, 2006, 有用遺伝子を探索するSuperSAGEアレイ法 バイオテクノロジージャーナル(羊土社) 6: 730-733.
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  29. 寺内良平、松村英生、神崎洋之、高橋芳弘、藤澤志津子、伊東明子、齋藤宏昌, 2007, イネーいもち病菌相互作用の解析, 雑誌「遺伝」(増刊号) 21: 131-134.
  30. 寺内良平、松村英生、齋藤宏昌、吉田健太郎、神崎洋之、Thomas Berberich, Matt Shenton, 藤澤志津子、伊東明子、Joe Win, Sophien Kamoun, 高野義孝、土佐幸雄, 2007, イネーいもち病菌相互作用の解析, 植物ー病原微生物の相互作用のダイナミズム(植物感染生理談話会論文集) 43: 49-54.
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  32. 寺内良平、阿部陽、高木宏樹、小杉俊一、吉田健太郎、夏目俊、八重樫弘樹、Muluneh Tamiru、神崎洋之、松村英生, 2013, 次世代シーケンサーを用いた新たな原因遺伝子同定法, 化学と生物 51:352-354.